Climate change denial and the abuse of peer review

CLEARING UP THE CLIMATE DEBATE: Professor Stephan Lewandowsky holds “sceptics” accountable for their subversion of the peer review process. On 20 April 2010, a BP oil rig exploded in the Gulf of Mexico, killing 11 workers and creating the largest oil spill in history. When President Obama sought to…

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People can get pretty riled up about hockey sticks. AAP

CLEARING UP THE CLIMATE DEBATE: Professor Stephan Lewandowsky holds “sceptics” accountable for their subversion of the peer review process.

On 20 April 2010, a BP oil rig exploded in the Gulf of Mexico, killing 11 workers and creating the largest oil spill in history.

When President Obama sought to hold the corporation accountable by creating a $20B damage fund, this provoked Republican Congressman from Texas Joe Barton to issue a public apology.

An apology not to the people affected by the oil spill … but to BP.

In a peculiar inversion of ethics, Barton called the President’s measures a “shakedown”, finding it a “tragedy in the first proportion” that a corporation should be held accountable for the consequences of its actions.

What does a Congressman’s inverted morality have to do with climate denial?

Quite a bit.

In a similar inversion of normal practice, most climate deniers avoid scrutiny by sidestepping the peer-review process that is fundamental to science, instead posting their material in the internet or writing books.

Books may be impressively weighty, but remember that they are printed because a publisher thinks they can make money, not necessarily because the content has scientific value.

Fiction sells, even if dressed up as science.

During peer review, by contrast, commercial interests are removed from the publication decision because journals are often published by not-for-profit professional organizations. Even if private publishers are involved, they make their profit primarily via university subscriptions, and universities subscribe to journals based on their reputation, rather than based on individual publication decisions.

Very occasionally a contrarian paper does appear in a peer-reviewed journal, which segments of the internet and the media immediately hail as evidence against global warming or its human causes, as if a single paper somehow nullifies thousands of previous scientific findings.

What are we to make of that handful of contrarian papers? Do they make a legitimate if dissenting contribution to scientific knowledge?

In some cases, perhaps.

But in many other cases, troubling ethical questions arise from examination of the public record surrounding contrarian papers.

For example, in 2003 the reputable journal Climate Research published a paleoclimatological analysis that concluded, in flat contradiction to virtually all existing research, that the 20th century was probably not the warmest of the last millennium. This paper, partially funded by the American Petroleum Institute, attracted considerable public and political attention because it seemingly offered relief from the need to address climate change.

The paper also engendered some highly unusual fall-out.

First, three editors of Climate Research resigned in protest over its publication, including the incoming editor-in-chief who charged that “…some editors were not as rigorous in the review process as is otherwise common.”

This highly unusual mass resignation was followed by an even more unusual public statement from the publisher that acknowledged flaws in the journal’s editorial process.

Three editorial resignations and a publisher’s acknowledgement of editorial flaws are not standard scientific practice and call for further examination of the authors and the accepting editor.

The first author of this paper, Dr Willie Soon, is an astrophysicist by training. In U.S. congressional testimony, he identified his “training” in paleoclimatology as attendance at workshops, conferences, and summer schools. (The people who teach such summer schools, actual climate scientists, published a scathing rebuttal of Soon’s paper.)

Undaunted, Dr Soon has since become an expert on polar bears, publishing a paper that accused the U.S. Geological Survey of being “unscientific” in its reports about the risks faced by polar bears from climate change.

Most recently, Dr Soon has become an expert on mercury poisoning, using the Wall Street Journal as a platform to assuage fears about mercury-contaminated fish because, after all, “mercury has always existed naturally in Earth’s environment.”

Lest one wonder what links paleoclimatology, Arctic ecology, and environmental epidemiology, the answer is not any conventional area of academic expertise but ideology.

As Professor Naomi Oreskes and historian Erik Conway have shown in their insightful book, Merchants of Doubt, the hallmark of organized denial is that the same pseudo-experts emerge from the same shadowy “think” tanks over and over to rail against what they call “junk science”.

Whether it is the link between smoking and lung cancer, between mercury and water poisoning, or between carbon emissions and climate change, ideology inverts facts and ethics whenever overwhelming scientific evidence suggests the need to regulate economic activity.

So what of the editor who accepted the flawed Climate Research paper, Dr Chris de Freitas of Auckland?

Later, De Freitas co-authored a paper in 2009 that some media outlets heralded as showing that climate change was down to nature.

One of the authors, Adjunct academic Bob Carter from James Cook University, claimed that “our paper confirms what many scientists already know: which is that no scientific justification exists for emissions regulation.” Welcome news indeed, at least for the coal industry, but does the paper support this conclusion?

No.

For starters, the 2009 paper by McLean, de Freitas, and Carter did not address long-term global warming at all.

It discussed the association between ocean currents and air temperature — in particular the time lag between the warm El Niño current and the ensuing increase in temperature.

Indeed, the article does not even contain the words “climate change” except in a citation of the IPCC, and its only conceivable connection with climate change arises from the speculative phrase “ … and perhaps recent trends in global temperature …” in the final sentence.

It appears ethically troubling to derive strong statements about emissions regulations from such a tentative clause in one’s final sentence in a paper on quite a different issue.

Such statements appear even more troubling if one considers paragraph 14 of the paper, which reads, “to remove the noise, the absolute values were replaced with derivative values based on variations. Here the derivative is the 12-month running average subtracted from the same average for data 12 months later.”

What happens to data if successive annual values are subtracted from each other? This mathematically removes any linear time trend.

In other words, temperatures could have doubled every other year and it would have escaped detection by the authors.

This removal of the trend did not escape detection by the scientific community, however, and the published rebuttal of this “it’s-all-natural” paper was as swift and devastating as it was for Dr Soon’s.

To remove the linear trend from temperature data in a paper that does not address climate change, and to then claim that nature is responsible for global warming and there is no scientific basis for emissions regulations smacks of an inversion of scientific ethics and practice.

Let us return to Congressman Barton.

Before apologizing to BP, not for the nearly $3,000,000 he has received in contributions from the oil, gas, and energy industries, but for President Obama seeking accountability from the corporation, Mr Barton also sponsored a contrived investigation of the famed “hockeystick” paper by Professor Michael Mann and colleagues.

The hockeystick is the iconic graph that shows the sky-rocketing temperatures of the last few decades in comparison to the relatively constant temperatures during the preceding centuries. The U.S. National Academy of Sciences affirmed the basic conclusions of Professor Mann, as have numerous other papers published during the last decade.

Mr. Barton, however, relied on a report by a certain Professor Wegman, who claimed to have identified statistical flaws in the analysis underlying the original hockeystick. (Even if correct, that criticism has no bearing on the overall conclusion of Professor Mann’s paper or on the numerous independent hockeysticks produced by other researchers.)

Professor Wegman subsequently published part of his report in the journal Computational Statistics and Data Analysis. Although normally a peer-reviewed journal, in this instance the paper was accepted a few days after submission, in July 2007, in an especially ironic twist as the paper tried to cast doubt on the quality of peer review in climate research.

Alas, the paper’s lifetime was cut tragically short when it was officially withdrawn by the publisher a few weeks ago.

Why?

The paper by Wegman and colleagues was officially withdrawn because of substantial plagiarism. Conforming to the typical pattern of inversions, Wegman also appears to have plagiarized large parts of his initial hockeystick critique for Congressman Barton, while additionally distorting and misrepresenting many of the conclusions of the cited authors.

We have examined just the tip of an iceberg of inversion of normal standards of ethics and scientific practice.

These multiple departures from common scientific practice are not isolated incidents — on the contrary, they represent a common thread that permeates all of climate denial.

Because climate denial is just that: denial, not scepticism.

Science is inherently sceptical, and peer-review is the instrument by which scientific scepticism is pursued.

Circumventing or subverting that process does not do justice to the public’s need for scientific accountability.

At a time when Greenland is losing around 9,000 tonnes of ice every second — all of which contributes to sea level rises – it is time to hold accountable those who invert common standards of science, decency, and ethics in pursuit of their agenda to delay action on climate change.

This is the sixth part of our series Clearing up the Climate Debate. To read the other instalments, follow the links below:

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  1. Marc Hendrickx

    Geologist

    You state:
    "The hockeystick is the iconic graph that shows the sky-rocketing temperatures of the last few decades in comparison to the relatively constant temperatures during the preceding centuries. The U.S. National Academy of Sciences affirmed the basic conclusions of Professor Mann, as have numerous other papers published during the last decade."

    This is a misrepresentation of the facts. The Hockey Stick is an iconic piece of bad science. It's most latest debunking in the peer reviewed press…

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    1. Tristan Croll

      logged in via Facebook

      In reply to Marc Hendrickx

      Actually, I would think a cognitive scientist would be the <i>perfect</i> person to ask for input on "the efforts of 'sceptics' to cloud the debate."

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    2. Paul Richards

      Paul Richards is a Friend of The Conversation.

      In reply to Tristan Croll

      But would the sceptics qualify?
      "Cognitive bias is a general term that is used to describe many observer effects in the human mind, some of which can lead to perceptual distortion, inaccurate judgement, or illogical interpretation"
      Kahneman, D., & Tversky, A. (1972). Subjective probability: A judgment of representativeness. Cognitive Psychology, 3, 430–454

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    3. Tim Burrows

      logged in via Twitter

      In reply to Marc Hendrickx

      Marc, it seems to me that Stephan is simply observing what is happening in the peer reviewed literature as opposed to what is happening outside of it. He observes that papers disagreeing with AGW almost never make it through the peer-review process. Those that do are almost always refuted very quickly. He observes the interaction of the scientific community in the example of the Hockey Stick paper.
      I don't think you need to have published widely in climate science to comment on motivation and behaviour, but it might help to have studied how people think.

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    4. John Mashey

      Semi-retired computer scientist/corporate executive

      In reply to Marc Hendrickx

      Marc Hendrickx:
      Are you wiling to stake *your* credibility on that of McShane & Wyner?
      That is, do you assure us that in your expert opinion that was a credible paper, in scholarship, science and statistics?

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    5. Barry Cooper

      Jack of many Trades

      In reply to Paul Richards

      Yes, the Soviets locked people like that up. All you had to do to qualify as mentally ill was disagree with them.

      You don't see the latent Fascism--Communism, same thing--in your psychological demonization of opponents, do you?

      Here is my piece on the topic: http://moderatesunited.blogspot.com/2008/01/global-warming.html

      You can't call me ignorant.

      I have debated AGW fools for a long time, and it always boils down to political consensus. Always, if someone disagrees, then their pedigree is criticized, but not their data. If they agree, then they could be garbage haulers, and you would grant them their genius.

      I have often said, because it is true, that you reliably judge the state of mind of leftists by what they accuse others of. Here, you are calling your opponents' opinions distorted, inaccurate, and illogical.

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  2. Douglas Cotton

    B.Sc.(Physics), B.A.(Econ), Dip.Bus.Admin

    It is obvious that the debate on climate change is dividing the scientific community. According to the article linked at the foot hereof the number of scientists now expressing dissent regarding man-made global warming is over 1,000 and climbing rapidly in the last two years when people are starting to notice that temperatures are actually falling since 2002. (There is now a statistically significant breakout from the IPCC projected trend between 2000 and 2011 -See my site http://earth-climate.com

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    1. Michael J. Biercuk

      Senior Lecturer in the School of Physics at University of Sydney

      In reply to Douglas Cotton

      It's worth pointing out that while *any* system can be improved, peer review works exceptionally well.

      Peer-review has successfully brought us quantum mechanics, atomic physics, semiconductor physics, materials science, modern mathematics, population dynamics, genetics, you name it...These may sound like esoteric academic subjects on their face, but just look at the applications that have come out of them - microprocessors, optical networking (the internet's backbone), crytography, new medical treatments, etc., etc. More or less all modern technology has come through a system of scientific peer-review.

      What evidence is there that peer-review is uniquely flawed on the topic of climate science?

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    2. James Harrison

      Postgraduate student at Monash University

      In reply to Douglas Cotton

      Credibility is an asset of great value to scientists of all disiplines.

      If you undertake any activity that has the potential to damage your credibility, whether this be authoring or co-authoring a paper of dubious scientific integrity, having your paper selectively reviewed as you suggest, or being the reviewer of such a paper, you stand to have your reputation and career irreversibly damaged. Thus, such activities are avoided.

      Furthermore, if and when you are published, you open yourself up to peer review from everyone, not just a select few.

      Why not submit the content of your webpage to a journal, see what happens?

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    3. Grant Burfield

      Dr

      In reply to Michael J. Biercuk

      http://assassinationscience.com/climategate/1/FOIA/mail/1054756929.txt
      Cook to Briffa - "It is also an ugly paper to review because it is rather mathematical, with a lot of Box-Jenkins stuff in it. It won't be easy to dismiss out of hand as the math appears to be correct theoretically".

      http://assassinationscience.com/climategate/1/FOIA/mail/1051190249.txt
      Tom Wigley - "Mike's idea to get editorial board members to resign will probably not work -- must get rid of von Storch too, otherwise holes will eventually fill up with people like Legates, Balling, Lindzen, Michaels, Singer, etc."

      http://assassinationscience.com/climategate/1/FOIA/mail/1089318616.txt
      Phil Jones - "I can't see either of these papers being in the next IPCC report. Kevin and I will keep them out somehow - even if we have to redefine what the peer-review literature is !"

      Uniquely flawed? Don't know. Certainly shoddy.

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  3. Kris Baum

    logged in via email @krisbaum.com

    Stephen,

    There are numerous peer reviewed papers that present starkly different views to the IPCC's AR4. Lindzen & Choi (2011), Spencer & Broswell (2010). There are many more. These papers conclude a much lower climate sensitivity for doubling CO2. Coupled with the fact that 40% increase in emissions has only resulted in 0.7c, i see compelling reasons to take their findings seriously.

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  4. Douglas Cotton

    B.Sc.(Physics), B.A.(Econ), Dip.Bus.Admin

    My comment above was a copy of a post I wrote for the previous topic before this similar topic opened. I will now address some of your specific comments.

    The use of the term "climate deniers" is nothing more than an arrogant statement that "I'm right and they're wrong." You might as well call Christians "evolution deniers" because they believe God created life, not some random process of nature. I suggest that a term like "climate cycle advocates" could be used for those who believe, as I do…

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    1. Toby Dagg

      logged in via Facebook

      In reply to Douglas Cotton

      Douglas, your post illustrates perfectly the points made by Stephan. Your claim that 1000 scientists - with the number climbing rapidly - now express dissent about man-made climate change is sourced from Climate Depot, a website run by the Committee for a Constructive Tomorrow (CFACT). The site is full of hair-curling pieces about the sinister agendas being pursued by 'warmists', including one about the Japanese developing hamburgers made from human faeces as a way of mitigating cattle industry emissions…

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    2. Michael J. Biercuk

      Senior Lecturer in the School of Physics at University of Sydney

      In reply to Douglas Cotton

      Dear Mr. Cotton,

      As a scientist generally I regret that you feel marginalized in this discussion. However, there is an easy fix: instead of posting links to your website, submit your work to peer-reviewed technical journals.

      It may seem harsh, but if one skips normal processes in scientific literature, one should not be surprised to find oneself "not being recognised as 'peers' of equal standing." Peer-review is the cornerstone of modern science - and surprising, contradictory, or even shocking ideas are welcome, so long as basic standards of scientific integrity and accuracy are met.

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  5. James Szabadics

    Technical Development and R&D Manager, Plantation Timber Industry

    The author of a paper does not get to choose their reviewers. If the paper is rejected by the reviewers it wont be published.

    So in light of this what point is Dr Lewandowski trying to make when he points out that Dr Soon had a paper published outside his main field of study. I guess he wants to illustrate the peer review system is not reliable to deliver a review after all otherwise the editors would not have resigned in protest? I dont think you can blame Dr Soon for the reviewers though as…

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    1. Roger Jones

      Professorial Research Fellow at Victoria University

      In reply to James Szabadics

      In the case of the Soon and Baliunas paper, the journal had half a dozen editors, one of whom was Dr Chris de Freitas. An author could send a paper to any editor they chose. Tame reviews were sought and obtained. When the paper was published it was clear that the improper use of statistics had been used to obtain a desired result.
      The incoming editor in chief demanded reforms of the journal that brought in consistent reviewing standards, the publisher demurred, he and several other editors resigned…

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    2. James Szabadics

      Technical Development and R&D Manager, Plantation Timber Industry

      In reply to Roger Jones

      Re energy in the ocean - OHC to a depth of 700m looks like a flat trend since 2003. I didnt expect that the trend for OHC would flatten if AGW was the main driver of climate change because our emissions of CO2 have increased steadily since 2003. Maybe temporary pause due to natural variation but what natural variation is at play here? 7 year stretch of flat OHC is unusual you would have to admit?

      OHC is another area showing the same flat or flattening trend as lower troposphere and sea level. With increased CO2 since 2003 of 16ppm this would not be what we would expect.

      http://www.nodc.noaa.gov/OC5/3M_HEAT_CONTENT/

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    3. Andrew Glikson

      Earth and paleo-climate scientist at Australian National University

      In reply to James Szabadics

      James,

      Wish you were right and global warming would halt ...

      Unfortunately the basic laws of physics (Planck law, stefan-Bolzmann law) require that the current rise in greenhouse gases (accelerating above 2 ppm CO2/year) raises the energy/temperature level of the system, now at 3.1 Watt/m2 above pre-industrial levels (Hansen et al., 2011).

      One can't argue with the basic laws of physics.

      The first decade of the 21st century is the warmest measured on the instrumental record.

      The apparent flattening of temprature profiles you refer to are related in part to strong La-Nina phases and the low in the 11-years solar cycle.

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    4. Thuong Nguyen

      logged in via email @gmail.com

      In reply to James Szabadics

      "The exchange between the atmosphere and the ocean is not linear, so no-one should expect smooth curves, or close correlation of CO2 and air temperature. That said, a detailed picture of these energy flows is not yet available - there are still plenty of open questions that require further research"

      That's what needed to be explained as many skeptics or denier often use a linear principle to dismiss climate change claim. However as long as the question is still open it is still inconclusive which…

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    5. James Szabadics

      Technical Development and R&D Manager, Plantation Timber Industry

      In reply to Andrew Glikson

      Andrew, I havent challenged any laws of physics. All I note is that the trend of 3 primary indicators of global warming appears to show that the rate of change has decreased despite the increase in greenhouse gasses. In other words some *other* force has counteracted the 3.1Watts/m2 for the last 10 years that was not counteracting it for the previous 20 years. Might i be so bold to suggest that Svensmarks theory fits in nicely there.

      You stated that the flattening of temperature, sea level and OHC trend I refered to is due to the strong La-Nina cycles - is there peer reviewed literature that supports the theory that since 2003 ENSO cycles have completely counteracted 380ppm CO2 induced warming?

      A brief look at ENSO here doesnt seem to show any obvious trend

      http://www1.ncdc.noaa.gov/pub/data/cmb/teleconnections/eln-f-pg.gif

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    6. Roger Jones

      Professorial Research Fellow at Victoria University

      In reply to Thuong Nguyen

      A very good article is by Trenberth and can be download from here if you don't mind the science content (it requires a close read because the pathways he describes get quite complex):
      http://www.cgd.ucar.edu/cas/Trenberth/trenberth.papers/EnergyDiagnostics09final2.pdf

      A lot blogs have concluded that this article says we don't know enough about human-induced climate change or even that that the theory cannot be supported. But in the article Trenberth is careful to say we have a good enough knowledge…

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    7. John Mashey

      Semi-retired computer scientist/corporate executive

      In reply to Roger Jones

      It's worse than that. See comments by another editor, <a href="http://www.sgr.org.uk/resources/stormy-times-climate-research">Clare Goodess</a>, including funding oddities.

      In addition, de Freitas had submitted a <a href="http://web.archive.org/web/20030526163750/www.cspg.org/deFreitas_climate.pdf">paper</a>;, to the Bulletin of the Canadian Petroleum Geology. The Editor, his brother Tim, had recused him and was having it reviewed by ... Willie Soon and Sonja Boehmer-Christiansen (Editor of Energy…

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    8. Thuong Nguyen

      logged in via email @gmail.com

      In reply to Roger Jones

      Thank you for the link professor Jones. Yeah, I am inclined to think that there may be a change in the depth of circulation since the earthquake and devastating tsunami in Asia about 7 years ago. Then it could be possible that the undersea volcanoes or tectonic cracks emit some coolant agent or water could seep down oil wells which have been drilled and cary the energy with it; nature is so immense to calculate.

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    9. Thuong Nguyen

      logged in via email @gmail.com

      In reply to Thuong Nguyen

      I wonder though, would the sea bed have stored the energy and released it as earthquake? My imagination is really wild.

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    10. James Szabadics

      Technical Development and R&D Manager, Plantation Timber Industry

      In reply to Roger Jones

      I would tend to dispute the notion that we have a "good" idea of the energy budget at the top of the atmosphere using measurement on a periodic basis based on satellite orbits. Transient veriables such as cloud, snow and ice all impact albedo for variable short term day and/or night time scales which may or may not be apparent at the time of the OLR satellite reading but would impact the amount of OLR read on the satellites sensor at a given pass.

      I dont see how you could adequately account for…

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    11. Simon Arnold

      Mr

      In reply to Roger Jones

      Given the known bias in climate models when closure of parametrisation is forced, and the fact the Trenberth is forcing his top of the atmosphere energy budget to 0.9 Wm -2 in the article you reference (see Trenberth KE, Fasullo JT, Kiehl J: Earth’s global energy budget. Bull Amer Meteor Soc 2009, 90:311-323. for a more complete discussion), I hope your models can give a better fit.

      I must say it was this issue that caused me to lose a bit of respect for Trenberth. By the time you get to Trenberth, K. E., and J. T. Fasullo, 2010: Tracking Earth's energy. Science, 328, 316-317. we find that the figure has been stripped of any of its uncertainty or provenance and becomes fact.

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    12. Thuong Nguyen

      logged in via email @gmail.com

      In reply to Simon Arnold

      Yeah I hope professor Jones' model can help stop all this dispute, it is starting to give me a headache.

      A wholistic model as well as long term climate cycle sounds good. I know that in the old days when people make ice-cream they add salt to the ice to make the temperature it colder so the ice-cream can form. This makes me think the salt in the sea may have cooling properties; also people say it's been the warmest on record in the last decade while the sea is cooling maybe most of the rains rained over the ocean.

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  6. Andrew Glikson

    Earth and paleo-climate scientist at Australian National University

    Responsible people do not, unless fully qualified and experienced:

    1. Enter a jet's cockpit to tell the pilot how to handle the plane in the midth of a storm.

    2. Interfere with critical surgery telling surgeons what to do.

    3. Tell people to keep smoking tobacco despite medical warning to the contary.

    In all these cases lives are in stake.

    As is the case with climate science where, based on the most up-to-date measurements and on the basic laws of physics and chemistry of the atmosphere, the world's premier science organizations (NASA/GISS, Colorado NSIDC, Potsdam Climate Impacts, Hadley-Met, CSIRO, BOM and so on), the world's academies of science and the bulk of the scientific peer review journals - indicate a major shift is taking place in the atmosphere/ocean/cryosphere conditions which allowed the emergence of agriculture and civilization since about 10,000 years ago.

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  7. Scott Cooper-Johnston

    logged in via Facebook

    As a passionate environmentalist, I am constantly saddened by this debate. What was once a complex series of issues facing our environment has become one unsophisticated debate. i.e. Are you a denier or an acceptor?

    How insulting.

    We can act now on dozens of fronts to address the damage we have caused over the last century or so. We do not require any consensus, we only require a will to begin the road to a cleaner future. Someone needs to turn the first spade full of dirt to create our new agricultural model, or our new energy model.

    The argument about how and why scientists should receive their kudos for predicting climate change is the biggest threat to this planet right now. We need ideas and solutions for a smarter future, the debate over AGW is a serious time-waster and it's time we moved on.

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  8. Andrew Montford

    Blogger

    I'm not sure why Prof Lewandowsky doesn't mention McIntyre and McKitrick as the source of the statistical criticisms of the Hockey Stick. However, he at least seems to accept the NAS panel findings and we know that the NAS panel, along with Wegman, accepted the validity of the M&M criticisms.

    The NAS panel also accepted McIntyre's criticism of the use of bristlecone pines in the Hockey Stick - these proxy records are widely agreed in the literature to be unsuitable for temperature reconstructions…

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    1. Brian Angliss

      climate/energy writer

      In reply to Andrew Montford

      Andrew, you've neglected to mention that Mann's more recent papers have essentially superseded the original hockey stick with better data, better statistical analyses, and yet still identified "hockey sticks" in the Northern Hemispheric temperature record both with and without tree ring proxies.

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    2. Andrew Montford

      Blogger

      In reply to Brian Angliss

      Brian

      I do cover Mann's 2008 paper in the book. I think it's fair to say that this is a paper with almost as many problems as the Hockey Stick itself.

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    3. Brian Angliss

      climate/energy writer

      In reply to Andrew Montford

      Such as? Reviewed papers or comments on the paper (including those by McIntyre, which I've read) are preferred, but not required. Jeff ID's claims do not count, however, as his analysis is flawed, a point I made to him last year at scholarsandrogues.com and to which he did not respond.

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    4. Andrew Montford

      Blogger

      In reply to Andrew Montford

      I vaguely remember your Scholars & Rogues piece. Can you remind me of your case?

      The problems were use of contaminated lake sediments and their interpretation in the opposite orientation to the original authors. Use of old version of Tornetrask. Use of Yamal instead of the Polar Urals update. Truncation of the decline in Briffa's MXD series plus use of an infilling algorithm to replace the truncated decline with an incline. I think there were others too.

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    5. Brian Angliss

      climate/energy writer

      In reply to Andrew Montford

      The gist of it was that Jeff's R-code showed that he was comparing proxy trends to the global temp trend in the calibration period. Mann et al's methodology was to compare proxie data to temperature trends locally (within the grid). I have no idea what effect that would produce, whether it would strengthen Jeff's point or weaken it, but he needed to revisit his analysis based on this difference regardless. After I pointed this out to him at S&R, he never responded, and while I looked a couple…

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  9. Andrew Montford

    Blogger

    As far as Prof Lewandowsky's point about "pal review" goes, I think he has a point.

    He points at de Freitas's review of Soon and Baliunas about which I can add some more detail. We know from the Climategate emails that de Freitas contacted one of the Hockey Stick authors, Ray Bradley, to review the paper. Bradley was too busy. We also know that one of the reviewers who accepted was a paleoclimatologist called Anthony Fowler, who is not AFAIK a sceptic. De Freitas has said that the others were not known sceptics either. This doesn't smack of pal review therefore, but without knowing the identities of the other reviewers it's impossible to know for sure.

    That said, I'm sure this kind of thing goes on. There is plenty of evidence of pal review in the climategate emails - there are several soft reviews of papers by Jones - and if one side is at it then the other probably is too.

    So we can probably agree that the peer review system is bust.

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    1. John Mashey

      Semi-retired computer scientist/corporate executive

      In reply to Andrew Montford

      Well, perhaps we can also agree that your book, the Hockey Stick Illusion:

      1) Relies on a key David Deming quote from the Journal of Scientific Exploration, in a book review of Crichton's sci-fi book. JSE publishes much ESP, UFO, reincarnaton and even dog astrology, but HSI treats it as a credible source, as do McKitrick and McIntyre, as they used it in 2005 talks.;

      2) Then HSI falsifies/fabricates a comment by Richard Lindzen in an attempt to ascribe a damaging quote to Jon Overpeck, for which…

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    2. Andrew Montford

      Blogger

      In reply to John Mashey

      That is a truly absurd comment.

      1. In what way to I rely on Deming's quote? I mention it, and as you point out I mention that he denies saying it. In what way does it matter where his comments were published? I discovered that he also said it in testimony before the US Senate. Did that stop him saying it. Your comments are fallacious.

      2. Fabricates a comment by Lindzen? The citation is given. It is here http://bit.ly/18RMgK.

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    3. Andrew Montford

      Blogger

      In reply to John Mashey

      Am I right in thinking that you are not actually disputing anything I say? You agree that Deming said the things he did about Overpeck? You agree the facts I set out about Mann and the Hockey Stick? If not, I'd like to hear them. Otherwise I think everyone will assume that you have no substantive arguments to make and have decided to engage in ad hominems.

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    4. Marc Hendrickx

      Geologist

      In reply to Andrew Montford

      You'll find the double standards that apply in this series of articles allow such contradictions. If all else fails it appears it is also permissible for one side to just make things up.

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    5. John Mashey

      Semi-retired computer scientist/corporate executive

      In reply to Marc Hendrickx

      Marc Hendrickx, you may have missed my earlier question:

      Are you wiling to stake *your* credibility on that of McShane & Wyner?
      That is, do you assure us that in your expert opinion that was a credible paper, in scholarship, science and statistics?

      I'll get back to HWQDAJ (He Who Quotes from Dog Astrology Journal) later.

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    6. Marc Hendrickx

      Geologist

      In reply to John Mashey

      The McShane and Wyner paper, and any other peer reviewed paper for that matter will stand on its own merit and time will tell whether or not it passes muster.You seem to be under the illusion that once a paper has passed peer review that the story ends.
      Science does not work that way. If you are interested in the longer term performance of peer reviewed papers I suggest you obtain a copy of "Why Most Published Research Findings Are False" by John P. A. Ioannidis

      http://www.plosmedicine.org/article/info:doi/10.1371/journal.pmed.0020124

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    7. John Mashey

      Semi-retired computer scientist/corporate executive

      In reply to Andrew Montford

      Since Andrew Montford aka Bishop Hill, who says he isn't a Bishop and name isn't Hill, I just use the label HWQDAJ = He Who Quotes from Dog Astrology Journal.

      I actually *read* Lindzen's piece. HWQDAJ either didn't read it directly, or had trouble with simple English or was eager to whack Jon Overpeck. I don’t know which. As is explained:
      http://en.wikipedia.org/w/index.php?title=Talk:The_Hockey_Stick_Illusion&oldid=380146816#HSI_pp.23-30.2C_421_..._dog_astrology

      'HSI, p.28: has:
      "Although…

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    8. John Mashey

      Semi-retired computer scientist/corporate executive

      In reply to Andrew Montford

      "Look! A Squirrel!" defense.
      Deming wrote his quote for JSE. He did not name Overrpeck there or for Inhofe. Lindzen named Overpeck, but offered no evidence beyond Deming's paper, which didn't. HWQDAJ doesn't seem to want to address this simple case, which takes no knowledge of science, just English, then goes into "Look! A Squirrel" defense mode. As seen in Strange Scholarship in the Wegman Report:
      http://deepclimate.org/2010/09/26/strange-scholarship-wegman-report/
      it can take many more pages…

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    9. John Mashey

      Semi-retired computer scientist/corporate executive

      In reply to Marc Hendrickx

      We seem to be in "Look! A Squirrel" mode today.
      No, I am not under that illusion, and I've written about it various times, as per:
      http://scienceblogs.com/deltoid/2008/08/john_mashey_on_how_to_learn_ab.php

      I've read Ioannidis and of course have heard of him since he works at Stanford, where I visit often.

      So, I'm not asking what the long-term verdict on it will be, I am asking:
      Are you wiling to stake *your* credibility on that of McShane & Wyner?
      That is, do you assure us that in your expert opinion…

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    10. Eli Rabett

      In reply to John Mashey

      JSE, not JSE, <a href="http://rabett.blogspot.com/2008/06/ask-for-it-under-counter-in-plain-brown.html">the science journal you ask for</a> under the counter in a plain brown bag? The one that William the Sane described as
      ---------------------------------
      Oh, come on. It's impossible to pick a best paper from JSE. It has everything: resurrection, homeopathy, zero-point energy, William Tiller.

      If I have to choose one, I pick this one . This guy weighed sheep while he was suffocating them with a plastic bag. He concluded...there's no way to tell what he concluded.
      -----------------------------------------

      Not that JSE. Please. . .

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    11. Eli Rabett

      In reply to Andrew Montford

      Before we agree to the catholic proposition that the peer review system is bust let us ask where. Clearly there are editors of scientific journals that have political standards. Sonja Boehmer-Christiansen and Benny Peiser spring to mind. It would be difficult to defend the proposition that they are not editing with their political standards in mind. This, of course, emphasizes the important role of the editor, not the reviewer

      What we have learned from the Eurojournal open review process is that legitimacy of peer review is enhanced by open review, a lesson jammed home by the reviews of Lindzen and Choi II as submitted to PNAS released recently by Richard Lindzen where the care that the referees took with the submission is clear, although their recommendation was not to publish.

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    12. Grant Burfield

      Dr

      In reply to John Mashey

      HWQDAJ = He Who Quotes from Dog Astrology Journal.

      A credit to you. Science at its finest.

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    13. Andrew Montford

      Blogger

      In reply to Andrew Montford

      Actually you are wrong - you have made an unwarranted assumption. But I'm not sure you are actually interested.

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  10. Simon Arnold

    Mr

    The thesis here is that peer review is essentially value free, uncorrupted by commercial and political concerns.

    But maybe climate science is a little different.

    I had a look for Prof Lewandowsky's contributions in the area of climate science, and only "Popular Consensus: Climate Change Set to Continue" Psychological Science 22, 460-463 seemed obvious.

    The study involves showing 200 Perth pedestrians the GISS anomalies 1880-2009 half described as share prices of SuperWidget and the other as…

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    1. Alistair McDhui

      Retired engineer

      In reply to Simon Arnold

      According to Wikipedia, '<i>Cognitive science is the interdisciplinary scientific study of minds as information processors. It includes research on how information is processed (in faculties such as perception, language, reasoning, and emotion), represented, and transformed in a (human or other animal) nervous system or machine (e.g., computer). Cognitive science consists of multiple research disciplines, including psychology, artificial intelligence, philosophy, neuroscience, linguistics, anthropology…

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  11. Alistair McDhui

    Retired engineer

    The crisis is 'climate science' is entirely of its own making. If it wants to continue to be accepted as a science it must accept that when well-qualified individuals work out where it went badly wrong, that's the way science works. It comes with the territory.

    When the CAGW hypothesis was devised by Sagan, it was entirely plausible because high feedback CO2-AGW was the only known way at the time you could explain palaeo-climate. However, when Hansen teamed up with Gore and published apocalyptic…

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    1. Andrew Glikson

      Earth and paleo-climate scientist at Australian National University

      In reply to Alistair McDhui

      Alistaire,

      You write: "Recent work shows the heating that triggers the end of an ice age is in the deep oceans, c. 1000 years before any change in air temperature."

      The argument that temeprature rise has preceded CO2 rise during glacial terminations is being repeated ad-infinitum by those who do not accept the evidence of climate and paleoclimate science.

      We do not live at a glacial termination but following a cooling trend of the Holocene interglacial, which started some 8000 years ago, a cooling…

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  12. Peter J Scott

    Retired English professor

    One hopes that Professor Lewandowsky, as a psychologist, could see the need for a study on those who base their analysis of denial on the assumption that CO2 theory is proven, and hence is undeniable.

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    1. John Mashey

      Semi-retired computer scientist/corporate executive

      In reply to Peter J Scott

      One hopes that retired English professors would have the time to study basic physics, i.e., like sophomore level 40 years ago, probably earlier now.
      if you want to learn, try David Archer's The LongThaw, or for math/physics, the book he uses to teach non-science majors: Global Warming: Understanding the Forecast or watch his lectures:
      http://geoflop.uchicago.edu/forecast/docs/lectures.html

      For CO2 not to be a greenhouse gas and cause warming, one would have to repeal Conservation of Energy and much quantum mechanics ...i.e., both of which are involved in running computers and sending data across the net to enable posts on a website.

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    2. Peter J Scott

      Retired English professor

      In reply to John Mashey

      John,
      Thank you for your advice. I am aware of CO2 theory as it pertains to experiments in the laboratory. My problem is how this theory has transmorphed from the laboratory into the atmosphere, where it has become the theoretical basis for the warming of the planet. This would appear to be a vast leap, particularly as serious questions concerning positive feedback remain unresolved.
      Surely, even a semi-retired computer scientist /corporate executive such as yourself might see that, at least for some of us more inquisitive, unaccepting souls, that this can be a stumbling block (which can lead to the discovery of other significant issues that similarly lack resolution).
      I have no objection to moving to renewable energy. However I do object to being told that it is mandatory on the basis of such unconvincing scientific evidence.

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    3. John Mashey

      Semi-retired computer scientist/corporate executive

      In reply to Peter J Scott

      Peter: I have recommended a general-audience book and a slightly more mathematical one for non-science college majors ... among the vast array of peer-reviewed evidence. You might also try Spencer Weart's fine history, "The Discovery of Global Warming" to be useful to understand what has been known, when. It is usefully online:
      http://www.aip.org/history/climate/co2.htm
      is the section you might want, but the whole history is good. (Spencer is a retired physicist is hosted at American Institute…

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  13. Kip Hansen

    Retired IT Professional, Humanitarian Missionary

    Apparently, this is going to be a one-sided 'conversation' about Climate Change. The author of this piece must be an understudy of the mud-slinging professional political-operative Joe Romm in the United States. The titled accuses skeptics of 'abuse of peer-review', then gives no examples. The author, Professor Stephan Lewandowsky, apparently had his eyes closed during the entire Climategate affair or has somehow 'inverted' the players - it was the Hockey Stick Team that was subverting the peer-review process, by their own admission, attempting to prevent contrarian papers from being published by pressuring editors and acting as reviewers of critics of their own work. Professor Stephan Lewandowsky should stick to cognitive science, as he apparently has yet to to actually read a paper related to climate science or to acquaint himself with even the most basics aspects of the controversies involved -- even his efforts at ad hom mud-slinging are amateurish.

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    1. Brian Angliss

      climate/energy writer

      In reply to Kip Hansen

      Kip, clearly you've failed to read the entire Independent Climate Change Email Review, but specifically those portions that investigated the "manipulation of peer review" claims you're repeating here. Here's what the ICCER found, summarized from my reporting on the investigation report.

      With respect to the "redefine peer review" email from Jones: "[McKitrick and Michaels 2004] 'can be readily shown to be scientifically flawed' for two reasons. Jones’ first reason is that 'if the CRUTEM3 trend is…

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    2. Andrew Montford

      Blogger

      In reply to Brian Angliss

      Brian

      You've raised many points there -

      1. Jones defence on the "redefine peer review" incident is not a defence of the allegation made. Jones (and/or his coauthors) put a sentence in the IPCC report saying that M&M's results were not statistically significant. McKitrick has said that this was a fabrication. For Jones to say he didn't like the paper for other reasons does not represent a defence against the charge of fabrication. (McKitrick has also said that Jones' new arguments are equally without…

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    3. Brian Angliss

      climate/energy writer

      In reply to Andrew Montford

      Again, with respect to Jones, the ICCER found that there was no fabrication as alleged by McKitrick. McKitrick alleged that Jones wrote a paragraph that Jones did not write and that only a recalculated p-value would provide proof, but Jones said "Before undertaking the kind of analysis in MM2004, it is essential to account for known signals (i.e. the North Atlantic Oscillation (NAO) and El Nino Southern Oscillation (ENSO) and possibly others) and then examine the residuals. It does not make sense…

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    4. Andrew Montford

      Blogger

      In reply to Andrew Montford

      Hi Brian

      Re Jones, you are repeating the point without really addressing the one I made. The statement that McKitrick's results were statistically insignificant can only be the result of a statistical significance test. Jones cannot produce it. If his argument was that McKitrick didn't account for ENSO then why didn't he say so? And again, where is his citation to support this new argument? Russell's conclusions are inconsistent with the evidence (or lack of it).

      I agree with your point about frustration…

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    5. Brian Angliss

      climate/energy writer

      In reply to Andrew Montford

      Given how many people say things that would be misinterpreted when they're angry and frustrated, I disagree that "redefine peer review" suggests anything beyond anger and frustration. Ultimately, the fact that MM2004 was specifically mentioned in the IPCC is the final

      And I disagree that a p-value calculation is always required - when something is clearly erroneous, all that's required is to point out the reasons why it's erroneous. If I were to say that the sky were pink, for example, you wouldn…

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    6. Andrew Montford

      Blogger

      In reply to Andrew Montford

      Surely a p-value is required for a statement about statistical significance? As I said, if he had a different objection to McKitrick's paper, he should have said so, not said it was statistically insignificant. And he should have provided a citation too.

      Re S&B, the panel had a single expert on peer review. Richard Horton of the Lancet. Horton indeed said that peer review can be heated. He also said that there is a line that can be crossed. Russell exonerated Jones without investigating if that…

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    7. Brian Angliss

      climate/energy writer

      In reply to Andrew Montford

      First, I apologize - I have not read your book, so I was not aware you had discussed Saiers there.

      That said, Googling the Jones quote "redefine what the peer-review literature is" turns up ~87,000 responses. Googling "Phil Jones" and "Sonja Boehmer-Christensen" turns up only about 2700 links. As for the Briffa email quote "extensive case for rejecting" I get about 5700 links. So I'll grant that the Boehmer-Christensen and Briffa issues might not have been as high profile but rather considered…

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    8. Andrew Montford

      Blogger

      In reply to Andrew Montford

      I don't think the IPCC authors are allowed to take a view on the paper. They are meant to be summarising what is in the peer reviewed literature. They can't subsititute their own opinions for those of the peer reviewers of the paper. No refutation in literature means they have to report it. This kind of thing is why so many sceptics think the IPCC is broken beyond repair.

      Re Hockey Stick Illusion, I would encourage you to take a look. It's important, I would say (and a good read too).

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    9. John Mashey

      Semi-retired computer scientist/corporate executive

      In reply to Andrew Montford

      I still want to hear from HWQDAJ was doing falsification or just unable to read English. "Actually you are wrong - you have made an unwarranted assumption. But I'm not sure you are actually interested." wasn't much of answer, although perhaps not up to '"Neither Dr. Wegman nor Dr. Said has ever engaged in plagiarism," says their attorney, Milton Johns, '

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    10. TREVOR RIDGWAY

      MR ( I am retired now )

      In reply to John Mashey

      Good grief ! ( to quote Charlie Brown )
      I've just struggled through this entire blog and despite the enormous number of spelling errors & failure to complete an explanation or convey an idea (without prejudice ) I have arrived at at least one conclusion !
      I now understand why Thomas Edison 'feigned deafness' and preferred to work alone !
      His output is evidence of his success !
      Wish there were more like him !

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    11. Michael Hodson

      health professional

      In reply to Andrew Montford

      Andrew,

      Of ocurse they are. That's the whole idea - to assess the literature and summarise the best evidence. It's this kind of misunderstanding amongst the 'skeptics', forming the basis for their hyperbolic assertions, that makes many people think it's rather pointless to engage with them.

      And having suffered partway through the HSI - it's an awful load of tripe.

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    12. Andrew Montford

      Blogger

      In reply to Andrew Montford

      Michael

      If you read a bit further, you will come across reference number 222, which shows that authors are meant to represent differences of opinion in the report.

      Do you have a source that suggests something different?

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    13. Andrew Montford

      Blogger

      In reply to Andrew Montford

      BTW Michael

      I'm not sure if your objections to HSI are factual or literary. If you have factual objections do let me know.

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    14. Michael Hodson

      health professional

      In reply to Andrew Montford

      But that doesn't mean that every single paper of any degree of quality is included. Otherwise there is no need for expert review, just a typist.

      The whole idea of a systematic review is to summarise the best evidence and to filter out the dregs to save everyone else the trouble of wasting their time reading them.

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    15. Andrew Montford

      Blogger

      In reply to Andrew Montford

      The guidance is quite clear - they have to summarise and include the dissenting views too. Your characterisation is not a reflection of the actual guidance.

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  14. John Dodds

    Retired Engineer

    Yes lets talk about the abuse of Peer Review.
    There is article by Svante Arrhenius dated 1896 that claims that in the greenhouse effect, where an energy photon is absorbed by a greenhouse gas, to result in more warming.

    The conclusion was "if the quantity of carbonic acid (CO2-a greenhouse gas) increases in geometric progression, the augmentation of the temperature will increase nearly in arithmetic progression."
    This finding has evolved onto the IPCC mantra (AR4, WG1, CH1, p116) that "more GHGs…

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    1. John Dodds

      Retired Engineer

      In reply to Michael Hodson

      NO, IT IS VERY SERIOUS.. I am accusing the peer reviewers & IPCC of making a mistake that has had enormous costly consequences.
      The Arrhenius 1896 paper claims that more GHGs means more warming, as adopted by IPCC. In reality it is NOT the added GHGs but the added energy photons that cause the warming. (doesn't the sun warm in the morning with added photons of solar insolation and cool in the evening when the number of photons decreases? ) I think Arrhenius drew his conclusion in order to adopt…

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    2. Michael Hodson

      health professional

      In reply to John Dodds

      So you kind of accept the fact that CO2 is an IR absorber which leads to warming, but you argue that we should ignore CO2 in this equation, because the energy originally came from the sun ??

      I was really hoping this was a joke.

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    3. Alistair McDhui

      Retired engineer

      In reply to Michael Hodson

      You are correct, but the intrinsic warming due to CO2 which Arrhenius assumed is actually a mistake in Tyndall's original experiment. It was done at constant volume so most of the warming was from the pressure rise. You can prove this by slackening the cap in the modern PET bottle experiment.

      But there's more! The residual warming may be from the thermalisation at the walls of the container [caused by IR scattering]. The next argument is that direct thermalisation is zero because at the same…

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  15. Barry Cooper

    Jack of many Trades

    Here is your fundamental fallacy on this topic: "commercial interests are removed from the publication decision because journals are often published by not-for-profit professional organization."

    Are you so dense as to be suggesting that people working in the AGW field are not paid? That they don't get grants, some of which fund their salaries? That they get paid to give speeches, and write articles?

    Would you at a minimum concede that those who have dedicated careers to this "field" would be…

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  16. Alistair McDhui

    Retired engineer

    You're having a laugh. The World is cooling fast, e.g.: http://bobtisdale.files.wordpress.com/2012/01/figure-102.png

    Once you correct the four major scientific mistakes in the IPCC models, this is perfectly explicable in terms of a biofeedback process increasing the albedo of low level clouds, with the 1990's heating being a combination of decreased cloud albedo and the heating part of ENSO.

    Net CO2-AGW may well be zero. The trouble is that too few people nowadays are capable of original science so have latched onto the mental crutch of computer modelling, Hansen has argued that to account for no warming of the atmosphere, aerosol cooling exactly counters AGW. This is bunkum: no null hypothesis. Time to end this farrago.

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